%Mario Giacobini Mon, Feb 13, 2012 at 4:37 PM %WBL 15 Feb 2012 @PROCEEDINGS{Giacobini:2012:EvoBio, title = {10th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, {EvoBIO 2012}}, year = 2012, editor = {Mario Giacobini and Leonardo Vanneschi and William S. Bush}, volume = {7246}, series = {LNCS}, address = {Malaga, Spain}, publisher_address = {}, month = {11-13 April}, organisation ={EvoStar}, publisher = {Springer Verlag}, ISBN = {}, size = {~256 pages}, } @InProceedings{manning:evobio12, author = {Timmy Manning and Paul Walsh }, title = {Automatic Task Decomposition for the NeuroEvolution of Augmenting Topologies {(NEAT)} Algorithm}, booktitle = {10th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, {EvoBIO 2012}}, year = {2012}, month = {11-13 April}, editor = {Mario Giacobini and Leonardo Vanneschi and William S. Bush}, series = {LNCS}, volume = {7246}, publisher = {Springer Verlag}, address = {Malaga, Spain}, pages = {1--12}, organisation = {EvoStar}, ISBN = {}, doi = {}, size = {}, abstract = {}, notes = {Part of \cite{Giacobini:2012:EvoBio} EvoBio'2012 held in conjunction with EuroGP2012, EvoCOP2012, EvoMusArt2012 and EvoApplications2012}, } @InProceedings{manzoni:evobio12, author = {Luca Manzoni and Mauro Castelli and Leonardo Vanneschi }, title = {Evolutionary Reaction Systems}, booktitle = {10th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, {EvoBIO 2012}}, year = {2012}, month = {11-13 April}, editor = {Mario Giacobini and Leonardo Vanneschi and William S. Bush}, series = {LNCS}, volume = {7246}, publisher = {Springer Verlag}, address = {Malaga, Spain}, pages = {13--24}, organisation = {EvoStar}, ISBN = {}, doi = {}, size = {}, abstract = {}, notes = {Part of \cite{Giacobini:2012:EvoBio} EvoBio'2012 held in conjunction with EuroGP2012, EvoCOP2012, EvoMusArt2012 and EvoApplications2012}, } @InProceedings{Rosenbaum:evobio12, author = {Lars Rosenbaum and Andreas Jahn and Andreas Zell }, title = {Optimizing the Edge Weights in Optimal Assignment Methods for Virtual Screening with Particle Swarm Optimization}, booktitle = {10th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, {EvoBIO 2012}}, year = {2012}, month = {11-13 April}, editor = {Mario Giacobini and Leonardo Vanneschi and William S. Bush}, series = {LNCS}, volume = {7246}, publisher = {Springer Verlag}, address = {Malaga, Spain}, pages = {25--36}, organisation = {EvoStar}, ISBN = {}, doi = {}, size = {}, abstract = {}, notes = {Part of \cite{Giacobini:2012:EvoBio} EvoBio'2012 held in conjunction with EuroGP2012, EvoCOP2012, EvoMusArt2012 and EvoApplications2012}, } @InProceedings{darabos:evobio12, author = {Christian Darabos and Mario Giacobini and Ting Hu and Jason H. Moore }, title = {L\'evy-flight {GP}: towards a new mutation paradigm}, booktitle = {10th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, {EvoBIO 2012}}, year = {2012}, month = {11-13 April}, editor = {Mario Giacobini and Leonardo Vanneschi and William S. Bush}, series = {LNCS}, volume = {7246}, publisher = {Springer Verlag}, address = {Malaga, Spain}, pages = {37--48}, organisation = {EvoStar}, ISBN = {}, doi = {}, size = {}, keywords = {genetic algorithms, genetic programming}, abstract = {}, notes = {Part of \cite{Giacobini:2012:EvoBio} EvoBio'2012 held in conjunction with EuroGP2012, EvoCOP2012, EvoMusArt2012 and EvoApplications2012}, } @InProceedings{Marini:evobio12, author = {Simone Marini and Alessandra Conversi }, title = {Understanding zooplankton long term variability through genetic programming}, booktitle = {10th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, {EvoBIO 2012}}, year = {2012}, month = {11-13 April}, editor = {Mario Giacobini and Leonardo Vanneschi and William S. Bush}, series = {LNCS}, volume = {7246}, publisher = {Springer Verlag}, address = {Malaga, Spain}, pages = {49--60}, organisation = {EvoStar}, ISBN = {}, doi = {}, size = {}, keywords = {genetic algorithms, genetic programming}, abstract = {}, notes = {Part of \cite{Giacobini:2012:EvoBio} EvoBio'2012 held in conjunction with EuroGP2012, EvoCOP2012, EvoMusArt2012 and EvoApplications2012}, } @InProceedings{Franken:evobio12, author = {Holger Franken and Alexander Seitz and Rainer Lehmann and Hans-Ulrich H\"aring and Norbert Stefan and Andreas Zell }, title = {Inferring disease-related metabolite dependencies with a Bayesian Optimization Algorithm}, booktitle = {10th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, {EvoBIO 2012}}, year = {2012}, month = {11-13 April}, editor = {Mario Giacobini and Leonardo Vanneschi and William S. Bush}, series = {LNCS}, volume = {7246}, publisher = {Springer Verlag}, address = {Malaga, Spain}, pages = {61--72}, organisation = {EvoStar}, ISBN = {}, doi = {}, size = {}, abstract = {}, notes = {Part of \cite{Giacobini:2012:EvoBio} EvoBio'2012 held in conjunction with EuroGP2012, EvoCOP2012, EvoMusArt2012 and EvoApplications2012}, } @InProceedings{Nobile:evobio12, author = {Marco Nobile and Daniela Besozzi and Paolo Cazzaniga and Giancarlo Mauri and Dario Pescini }, title = {A {GPU-based} Multi-Swarm {PSO} Method for Parameter Estimation in Stochastic Biological Systems Exploiting Discrete-Time Target Series}, booktitle = {10th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, {EvoBIO 2012}}, year = {2012}, month = {11-13 April}, editor = {Mario Giacobini and Leonardo Vanneschi and William S. Bush}, series = {LNCS}, volume = {7246}, publisher = {Springer Verlag}, address = {Malaga, Spain}, pages = {73--84}, organisation = {EvoStar}, ISBN = {}, doi = {}, size = {}, abstract = {}, notes = {Part of \cite{Giacobini:2012:EvoBio} EvoBio'2012 held in conjunction with EuroGP2012, EvoCOP2012, EvoMusArt2012 and EvoApplications2012}, } @InProceedings{Pinheiro:evobio12, author = {Fl\'avio Pinheiro and Francisco Santos and Jorge Pacheco }, title = {Tracking the evolution of cooperation in complex networked populations}, booktitle = {10th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, {EvoBIO 2012}}, year = {2012}, month = {11-13 April}, editor = {Mario Giacobini and Leonardo Vanneschi and William S. Bush}, series = {LNCS}, volume = {7246}, publisher = {Springer Verlag}, address = {Malaga, Spain}, pages = {85--95}, organisation = {EvoStar}, ISBN = {}, doi = {}, size = {}, abstract = {}, notes = {Part of \cite{Giacobini:2012:EvoBio} EvoBio'2012 held in conjunction with EuroGP2012, EvoCOP2012, EvoMusArt2012 and EvoApplications2012}, } @InProceedings{vanneschi:evobio12, author = {Leonardo Vanneschi and Matteo Mondini and Martino Bertoni and Alberto Ronchi and Mattia Stefano }, title = {{GeNet}: A Graph-Based Genetic Programming Framework for the Reverse Engineering of Gene Regulatory Networks}, booktitle = {10th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, {EvoBIO 2012}}, year = {2012}, month = {11-13 April}, editor = {Mario Giacobini and Leonardo Vanneschi and William S. Bush}, series = {LNCS}, volume = {7246}, publisher = {Springer Verlag}, address = {Malaga, Spain}, pages = {96--107}, organisation = {EvoStar}, ISBN = {}, doi = {}, size = {}, keywords = {genetic algorithms, genetic programming}, abstract = {}, notes = {Part of \cite{Giacobini:2012:EvoBio} EvoBio'2012 held in conjunction with EuroGP2012, EvoCOP2012, EvoMusArt2012 and EvoApplications2012}, } @InProceedings{gonzalez-alvarez:evobio12, author = {David L. Gonz\'alez-\'Alvarez and Miguel A. Vega-Rodr\'iguez and Juan A. G\'omez-Pulido and Juan M. S\'anchez-P\'erez }, title = {Finding Motifs in {DNA} Sequences Applying a Multiobjective Artificial Bee Colony {(MOABC)} Algorithm}, booktitle = {10th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, {EvoBIO 2012}}, year = {2012}, month = {11-13 April}, editor = {Mario Giacobini and Leonardo Vanneschi and William S. Bush}, series = {LNCS}, volume = {7246}, publisher = {Springer Verlag}, address = {Malaga, Spain}, pages = {108--119}, organisation = {EvoStar}, ISBN = {}, doi = {}, size = {}, abstract = {}, notes = {Part of \cite{Giacobini:2012:EvoBio} EvoBio'2012 held in conjunction with EuroGP2012, EvoCOP2012, EvoMusArt2012 and EvoApplications2012}, } @InProceedings{PAN:evobio12, author = {Qinxin Pan and Christian Darabos and Jason H. Moore }, title = {The Role of Mutations in Whole Genome Duplication}, booktitle = {10th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, {EvoBIO 2012}}, year = {2012}, month = {11-13 April}, editor = {Mario Giacobini and Leonardo Vanneschi and William S. Bush}, series = {LNCS}, volume = {7246}, publisher = {Springer Verlag}, address = {Malaga, Spain}, pages = {120--131}, organisation = {EvoStar}, ISBN = {}, doi = {}, size = {}, abstract = {}, notes = {Part of \cite{Giacobini:2012:EvoBio} EvoBio'2012 held in conjunction with EuroGP2012, EvoCOP2012, EvoMusArt2012 and EvoApplications2012}, } @InProceedings{holzinger:evobio12, author = {}, title = {Comparison of methods for meta-dimensional data analysis using in silico and biological data sets}, booktitle = {10th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, {EvoBIO 2012}}, year = {2012}, month = {11-13 April}, editor = {Mario Giacobini and Leonardo Vanneschi and William S. Bush}, series = {LNCS}, volume = {7246}, publisher = {Springer Verlag}, address = {Malaga, Spain}, pages = {132--143}, organisation = {EvoStar}, ISBN = {}, doi = {}, size = {}, abstract = {}, notes = {Part of \cite{Giacobini:2012:EvoBio} EvoBio'2012 held in conjunction with EuroGP2012, EvoCOP2012, EvoMusArt2012 and EvoApplications2012}, } @InProceedings{santander-jimenez:evobio12, author = {Sergio Santander-Jim\'enez and Miguel A. Vega-Rodr\'iguez and Juan A. G\'omez-Pulido and Juan M. S\'anchez-P\'erez }, title = {Inferring Phylogenetic Trees Using a Multiobjective Artificial Bee Colony Algorithm}, booktitle = {10th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, {EvoBIO 2012}}, year = {2012}, month = {11-13 April}, editor = {Mario Giacobini and Leonardo Vanneschi and William S. Bush}, series = {LNCS}, volume = {7246}, publisher = {Springer Verlag}, address = {Malaga, Spain}, pages = {144--155}, organisation = {EvoStar}, ISBN = {}, doi = {}, size = {}, abstract = {}, notes = {Part of \cite{Giacobini:2012:EvoBio} EvoBio'2012 held in conjunction with EuroGP2012, EvoCOP2012, EvoMusArt2012 and EvoApplications2012}, } @InProceedings{asenciocortes:evobio12, author = {Gualberto Asencio-Cort\'es and Jes\'us S. Aguilar-Ruiz and Alfonso E. M\'arquez-Chamorro and Roberto Ruiz and Cosme E. Santiesteban-Toca }, title = {Prediction of mitochondrial matrix protein structures based on feature selection and fragment assembly}, booktitle = {10th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, {EvoBIO 2012}}, year = {2012}, month = {11-13 April}, editor = {Mario Giacobini and Leonardo Vanneschi and William S. Bush}, series = {LNCS}, volume = {7246}, publisher = {Springer Verlag}, address = {Malaga, Spain}, pages = {156--167}, organisation = {EvoStar}, ISBN = {}, doi = {}, size = {}, abstract = {}, notes = {Part of \cite{Giacobini:2012:EvoBio} EvoBio'2012 held in conjunction with EuroGP2012, EvoCOP2012, EvoMusArt2012 and EvoApplications2012}, } @InProceedings{kancherla:evobio12, author = {Kesav Kancherla and Srinivas Mukkala }, title = {Feature Selection for Lung Cancer Detection using {SVM} based Recursive Feature Elimination Method}, booktitle = {10th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, {EvoBIO 2012}}, year = {2012}, month = {11-13 April}, editor = {Mario Giacobini and Leonardo Vanneschi and William S. Bush}, series = {LNCS}, volume = {7246}, publisher = {Springer Verlag}, address = {Malaga, Spain}, pages = {168--179}, organisation = {EvoStar}, ISBN = {}, doi = {}, size = {}, abstract = {}, notes = {Part of \cite{Giacobini:2012:EvoBio} EvoBio'2012 held in conjunction with EuroGP2012, EvoCOP2012, EvoMusArt2012 and EvoApplications2012}, } @InProceedings{Spirov:evobio12, author = {Alexander Spirov and Nina Golyandina and David Holloway and Theodore Alexandrov and Ekaterina Spirova and Francisco Lopes }, title = {Measuring gene expression noise in early Drosophila embryos: the highly dynamic compartmentalized micro-environment of the blastoderm is one of the main sources of noise}, booktitle = {10th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, {EvoBIO 2012}}, year = {2012}, month = {11-13 April}, editor = {Mario Giacobini and Leonardo Vanneschi and William S. Bush}, series = {LNCS}, volume = {7246}, publisher = {Springer Verlag}, address = {Malaga, Spain}, pages = {180--191}, organisation = {EvoStar}, ISBN = {}, doi = {}, size = {}, abstract = {}, notes = {Part of \cite{Giacobini:2012:EvoBio} EvoBio'2012 held in conjunction with EuroGP2012, EvoCOP2012, EvoMusArt2012 and EvoApplications2012}, } @InProceedings{Granizo-Mackenzie:evobio12, author = {Delaney Granizo-Mackenzie and Jason H. Moore }, title = {Artificial Immune Systems Perform Valuable Work When Detecting Epistasis in Human Genetic Datasets}, booktitle = {10th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, {EvoBIO 2012}}, year = {2012}, month = {11-13 April}, editor = {Mario Giacobini and Leonardo Vanneschi and William S. Bush}, series = {LNCS}, volume = {7246}, publisher = {Springer Verlag}, address = {Malaga, Spain}, pages = {192--203}, organisation = {EvoStar}, ISBN = {}, doi = {}, size = {}, abstract = {}, notes = {Part of \cite{Giacobini:2012:EvoBio} EvoBio'2012 held in conjunction with EuroGP2012, EvoCOP2012, EvoMusArt2012 and EvoApplications2012}, } @InProceedings{Buchanan:evobio12, author = {Carrie Buchanan and John Wallace and Alex Frase and Eric Torstenson and Sarah Pendergrass and Marylyn Ritchie }, title = {A Biologically Informed Method for Detecting Associations with Rare Variants}, booktitle = {10th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, {EvoBIO 2012}}, year = {2012}, month = {11-13 April}, editor = {Mario Giacobini and Leonardo Vanneschi and William S. Bush}, series = {LNCS}, volume = {7246}, publisher = {Springer Verlag}, address = {Malaga, Spain}, pages = {204--215}, organisation = {EvoStar}, ISBN = {}, doi = {}, size = {}, abstract = {}, notes = {Part of \cite{Giacobini:2012:EvoBio} EvoBio'2012 held in conjunction with EuroGP2012, EvoCOP2012, EvoMusArt2012 and EvoApplications2012}, } @InProceedings{pizzuti:evobio12, author = {Clara Pizzuti and Simona E. Rombo and Elena Marchiori }, title = {Complex detection in protein-protein interaction networks: a compact overview for researchers and practitioners}, booktitle = {10th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, {EvoBIO 2012}}, year = {2012}, month = {11-13 April}, editor = {Mario Giacobini and Leonardo Vanneschi and William S. Bush}, series = {LNCS}, volume = {7246}, publisher = {Springer Verlag}, address = {Malaga, Spain}, pages = {216--227}, organisation = {EvoStar}, ISBN = {}, doi = {}, size = {}, abstract = {}, notes = {Part of \cite{Giacobini:2012:EvoBio} EvoBio'2012 held in conjunction with EuroGP2012, EvoCOP2012, EvoMusArt2012 and EvoApplications2012}, } @InProceedings{Santiesteban-Toca:evobio12, author = {Cosme E. Santiesteban-Toca and Alfonso E. M\'arquez-Chamorro and Gualberto Asencio-Cort\'es and Jes\'us S. Aguilar-Ruiz }, title = {Short-range interactions and decision tree-based protein contact map predictor}, booktitle = {10th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, {EvoBIO 2012}}, year = {2012}, month = {11-13 April}, editor = {Mario Giacobini and Leonardo Vanneschi and William S. Bush}, series = {LNCS}, volume = {7246}, publisher = {Springer Verlag}, address = {Malaga, Spain}, pages = {228--237}, organisation = {EvoStar}, ISBN = {}, doi = {}, size = {}, abstract = {}, notes = {Part of \cite{Giacobini:2012:EvoBio} EvoBio'2012 held in conjunction with EuroGP2012, EvoCOP2012, EvoMusArt2012 and EvoApplications2012}, } @InProceedings{MarquezChamorro:evobio12, author = {Alfonso E. M\'arquez-Chamorro and Federico Divina and Jes\'us S. Aguilar-Ruiz and Jaume Bacardit and Gualberto Asencio-Cort\'es and Cosme E. Santiesteban-Toca }, title = {A {NSGA-II} Algorithm for the Residue-residue Contact Prediction}, booktitle = {10th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, {EvoBIO 2012}}, year = {2012}, month = {11-13 April}, editor = {Mario Giacobini and Leonardo Vanneschi and William S. Bush}, series = {LNCS}, volume = {7246}, publisher = {Springer Verlag}, address = {Malaga, Spain}, pages = {238--248}, organisation = {EvoStar}, ISBN = {}, doi = {}, size = {}, abstract = {}, notes = {Part of \cite{Giacobini:2012:EvoBio} EvoBio'2012 held in conjunction with EuroGP2012, EvoCOP2012, EvoMusArt2012 and EvoApplications2012}, } @InProceedings{langdon:evobio12, author = {W. B. Langdon and J. Arno }, title = {In Silico Infection of the Human Genome}, booktitle = {10th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, {EvoBIO 2012}}, year = {2012}, month = {11-13 April}, editor = {Mario Giacobini and Leonardo Vanneschi and William S. Bush}, series = {LNCS}, volume = {7246}, publisher = {Springer Verlag}, address = {Malaga, Spain}, pages = {249--252}, organisation = {EvoStar}, ISBN = {}, doi = {}, size = {}, abstract = {}, notes = {Part of \cite{Giacobini:2012:EvoBio} EvoBio'2012 held in conjunction with EuroGP2012, EvoCOP2012, EvoMusArt2012 and EvoApplications2012}, } @InProceedings{cerutti:evobio12, author = {Francesco Cerutti and Luigi Bertolotti and Tony L. Goldberg and Mario Giacobini }, title = {Improving Phylogenetic Tree Interpretability by means of Evolutionary Algorithms}, booktitle = {10th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, {EvoBIO 2012}}, year = {2012}, month = {11-13 April}, editor = {Mario Giacobini and Leonardo Vanneschi and William S. Bush}, series = {LNCS}, volume = {7246}, publisher = {Springer Verlag}, address = {Malaga, Spain}, pages = {253--256}, organisation = {EvoStar}, ISBN = {}, doi = {}, size = {}, abstract = {}, notes = {Part of \cite{Giacobini:2012:EvoBio} EvoBio'2012 held in conjunction with EuroGP2012, EvoCOP2012, EvoMusArt2012 and EvoApplications2012}, }