String: a programming language for the evolution of ribozymes in a new computational protocell model
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- @InProceedings{Islam:alife22,
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author = "Mohiul Islam and Nawwaf Kharma and Peter Grogono",
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title = "String: a programming language for the evolution of
ribozymes in a new computational protocell model",
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booktitle = "Proceedings of the 2022 Conference on Artificial
Life",
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year = "2022",
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editor = "Silvia Holler and Richard Loeffler and
Stuart Bartlett",
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pages = "362--370",
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month = jul # " 18-22",
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organisation = "ISAL",
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publisher = "MIT Press",
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note = "54",
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keywords = "genetic algorithms, genetic programming",
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URL = "https://direct.mit.edu/isal/proceedings-pdf/isal/34/54/2035323/isal_a_00538.pdf",
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DOI = "doi:10.1162/isal_a_00538",
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abstract = "String is a new computer language designed
specifically for the implementation of ‘ribozymes’,
the active entities within a new (highly simplified)
model of protocellular life. The purpose of the model
(which is presented here, only in outline) is the study
of the abstract nature of simple cellular life and its
relationship to computation. This model contains
passive and active entities; passive entities are data
and active ones are executable data (or programs). All
programs in our model are written or evolved in String.
In this paper, we describe String and provide examples
of both hand-written and evolved String programs
belonging to different functional categories needed for
cellular operation (e.g., mass transporter, information
transporter, transformer, replicator and translator).
Results from the evolutionary runs are presented and
discussed, where almost all ribozymes reached their
optimum fitness.",
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notes = "held virtually due to the ongoing COVID-19 pandemic.
https://alife.org/conference/alife-2022/",
- }
Genetic Programming entries for
Mohiul Islam
Nawwaf Kharma
Peter Grogono
Citations