A multidimensional genetic programming approach for identifying epsistatic gene interactions

Created by W.Langdon from gp-bibliography.bib Revision:1.8051

@InProceedings{LaCava:2018:GECCOcomp,

• author = "William {La Cava} and Sara Silva and Kourosh Danai and Lee Spector and Leonardo Vanneschi and Jason H. Moore",
• title = "A multidimensional genetic programming approach for identifying epsistatic gene interactions",
• booktitle = "GECCO '18: Proceedings of the Genetic and Evolutionary Computation Conference Companion",
• year = "2018",
• editor = "Carlos Cotta and Tapabrata Ray and Hisao Ishibuchi and Shigeru Obayashi and Bogdan Filipic and Thomas Bartz-Beielstein and Grant Dick and Masaharu Munetomo and Silvino {Fernandez Alzueta} and Thomas Stuetzle and Pablo Valledor Pellicer and Manuel Lopez-Ibanez and Daniel R. Tauritz and Pietro S. Oliveto and Thomas Weise and Borys Wrobel and Ales Zamuda and Anne Auger and Julien Bect and Dimo Brockhoff and Nikolaus Hansen and Rodolphe {Le Riche} and Victor Picheny and Bilel Derbel and Ke Li and Hui Li and Xiaodong Li and Saul Zapotecas and Qingfu Zhang and Stephane Doncieux and Richard Duro and Joshua Auerbach and Harold {de Vladar} and Antonio J. Fernandez-Leiva and JJ Merelo and Pedro A. Castillo-Valdivieso and David Camacho-Fernandez and Francisco {Chavez de la O} and Ozgur Akman and Khulood Alyahya and Juergen Branke and Kevin Doherty and Jonathan Fieldsend and Giuseppe Carlo Marano and Nikos D. Lagaros and Koichi Nakayama and Chika Oshima and Stefan Wagner and Michael Affenzeller and Boris Naujoks and Vanessa Volz and Tea Tusar and Pascal Kerschke and Riyad Alshammari and Tokunbo Makanju and Brad Alexander and Saemundur O. Haraldsson and Markus Wagner and John R. Woodward and Shin Yoo and John McCall and Nayat Sanchez-Pi and Luis Marti and Danilo Vasconcellos and Masaya Nakata and Anthony Stein and Nadarajen Veerapen and Arnaud Liefooghe and Sebastien Verel and Gabriela Ochoa and Stephen L. Smith and Stefano Cagnoni and Robert M. Patton and William {La Cava} and Randal Olson and Patryk Orzechowski and Ryan Urbanowicz and Ivanoe {De Falco} and Antonio {Della Cioppa} and Ernesto Tarantino and Umberto Scafuri and P. G. M. Baltus and Giovanni Iacca and Ahmed Hallawa and Anil Yaman and Alma Rahat and Handing Wang and Yaochu Jin and David Walker and Richard Everson and Akira Oyama and Koji Shimoyama and Hemant Kumar and Kazuhisa Chiba and Pramudita Satria Palar",
• isbn13 = "978-1-4503-5764-7",
• pages = "23--24",
• address = "Kyoto, Japan",
• DOI = "doi:10.1145/3205651.3208217",
• publisher = "ACM",
• publisher_address = "New York, NY, USA",
• month = "15-19 " # jul,
• organisation = "SIGEVO",
• keywords = "genetic algorithms, genetic programming",
• abstract = "We propose a novel methodology for binary and multiclass classification that uses genetic programming to construct features for a nearest centroid classifier. The method, coined M4GP, improves upon earlier approaches in this vein (M2GP and M3GP) by simplifying the program encoding, using advanced selection methods, and archiving solutions during the run. In our recent paper, we test this strategy against traditional GP formulations of the classification problem, showing that this framework outperforms boolean and floating point encodings. In comparison to several machine learning techniques, M4GP achieves the best overall ranking on benchmark problems. We then compare our algorithm against state-of-the-art machine learning approaches to the task of disease classification using simulated genetics datasets with up to 5000 features. The results suggest that our proposed approach performs on par with the best results in literature with less computation time, while producing simpler models.",
• notes = "Also known as \cite{3208217} GECCO-2018 A Recombination of the 27th International Conference on Genetic Algorithms (ICGA-2018) and the 23rd Annual Genetic Programming Conference (GP-2018)",

}

Genetic Programming entries for William La Cava Sara Silva Kourosh Danai Lee Spector Leonardo Vanneschi Jason H Moore

Citations