Can neural network constraints in GP provide power to detect genes associated with human disease?

Created by W.Langdon from gp-bibliography.bib Revision:1.8129

@InProceedings{bush:evows05,

• author = "William S. Bush and Alison A. Motsinger and Scott M. Dudek and Marylyn D. Ritchie",
• title = "Can neural network constraints in GP provide power to detect genes associated with human disease?",
• booktitle = "Applications of Evolutionary Computing, EvoWorkshops2005: {EvoBIO}, {EvoCOMNET}, {EvoHOT}, {EvoIASP}, {EvoMUSART}, {EvoSTOC}",
• year = "2005",
• month = "30 " # mar # "-1 " # apr,
• editor = "Franz Rothlauf and Juergen Branke and Stefano Cagnoni and David W. Corne and Rolf Drechsler and Yaochu Jin and Penousal Machado and Elena Marchiori and Juan Romero and George D. Smith and Giovanni Squillero",
• series = "LNCS",
• volume = "3449",
• publisher = "Springer Verlag",
• address = "Lausanne, Switzerland",
• publisher_address = "Berlin",
• pages = "44--53",
• keywords = "genetic algorithms, genetic programming, evolutionary computation, ANN",
• ISBN = "3-540-25396-3",
• ISSN = "0302-9743",
• URL = "https://rdcu.be/dEt3y",
• DOI = "doi:10.1007/978-3-540-32003-6_5",
• DOI = "doi:10.1007/b106856",
• size = "10 pages",
• abstract = "A major goal of human genetics is the identification of susceptibility genes associated with common, complex diseases. Identifying gene-gene and gene-environment interactions which comprise the genetic architecture for a majority of common diseases is a difficult challenge. To this end, novel computational approaches have been applied to studies of human disease. Previously, a GP neural network (GPNN) approach was employed. Although the GPNN method has been quite successful, a clear comparison of GPNN and GP alone to detect genetic effects has not been made. In this paper, we demonstrate that using NN evolved by GP can be more powerful than GP alone. This is most likely due to the confined search space of the GPNN approach, in comparison to a free form GP. This study demonstrates the benefits of using GP to evolve NN in studies of the genetics of common, complex human disease.",
• notes = "EvoWorkshops2005

  Center for Human Genetics Research, Department of Molecular Physiology & Biophysics, Vanderbilt University, Nashville, TN, 37232, USA",

}

Genetic Programming entries for William S Bush Alison A Motsinger Scott M Dudek Marylyn D Ritchie

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