Classification and Screening of Recognition Protein Complexes with Genetic Programming

Created by W.Langdon from gp-bibliography.bib Revision:1.8178

@InProceedings{Kuo:2011:BIBE,

• author = "Huang-Cheng Kuo and Jia-Hao Li",
• title = "Classification and Screening of Recognition Protein Complexes with Genetic Programming",
• booktitle = "11th IEEE International Conference on Bioinformatics and Bioengineering (BIBE 2011)",
• year = "2011",
• month = "24-26 " # oct,
• pages = "287--290",
• address = "Taichung",
• size = "4 pages",
• abstract = "A protein complex is either transient or obligate. In the organisms, proteins recognise each other with their binding sites and become transient protein complexes. Proteins perform their functions through protein-protein recognition. In this paper, we train a model by genetic programming with physicochemical properties information of the binding sites. The model classifies and screens the proteins of recognition interactions. The model achieves an average classification accuracy of 75percent. For screening, given a protein with concave binding site and a database of proteins with convex binding site, from the database we retrieve a small set of proteins in which one of them recognises with the query protein. In average, 65percent of proteins in the database are screened out.",
• keywords = "genetic algorithms, genetic programming, average classification accuracy, concave binding site, convex binding site, organisms, physicochemical properties, protein database, protein-protein recognition, query protein, transient protein complexes, biochemistry, biological techniques, cellular biophysics, microorganisms, molecular biophysics, physiological models, proteins",
• DOI = "doi:10.1109/BIBE.2011.51",
• notes = "Also known as \cite{6089842}",

}

Genetic Programming entries for Huang-Cheng Kuo Jia-Hao Li

Citations