Automated DNA Motif Discovery

Created by W.Langdon from gp-bibliography.bib Revision:1.8120

@Misc{arXiv:1002.0065v1,

• author = "W. B. Langdon and Olivia {Sanchez Graillet} and A. P. Harrison",
• title = "Automated {DNA} Motif Discovery",
• howpublished = "arXiv",
• year = "2010",
• month = "30 " # jan,
• keywords = "genetic algorithms, genetic programming, Bioinformatics, motif, regular expression, strongly typed genetic programming, context-free grammar, pseudogene, short and microRNAs, non-coding transcripts, systems biology, machine learning, Bioinformatics, motif, regular expression",
• URL = "http://arxiv.org/abs/1002.0065v1",
• size = "12 pages",
• abstract = "Ensembl's human non-coding and protein coding genes are used to automatically find DNA pattern motifs. The Backus-Naur form (BNF) grammar for regular expressions (RE) is used by genetic programming to ensure the generated strings are legal. The evolved motif suggests the presence of Thymine followed by one or more Adenines etc. early in transcripts indicate a non-protein coding gene.",

}

Genetic Programming entries for William B Langdon Olivia Sanchez Graillet Andrew P Harrison

Citations