GEARNet: grammatical evolution with artificial regulatory networks
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gp-bibliography.bib Revision:1.8051
- @InProceedings{Lopes:2013:GECCOa,
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author = "Rui L. Lopes and Ernesto Costa",
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title = "{GEARNet}: grammatical evolution with artificial
regulatory networks",
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booktitle = "GECCO '13: Proceeding of the fifteenth annual
conference on Genetic and evolutionary computation
conference",
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year = "2013",
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editor = "Christian Blum and Enrique Alba and Anne Auger and
Jaume Bacardit and Josh Bongard and Juergen Branke and
Nicolas Bredeche and Dimo Brockhoff and
Francisco Chicano and Alan Dorin and Rene Doursat and
Aniko Ekart and Tobias Friedrich and Mario Giacobini and
Mark Harman and Hitoshi Iba and Christian Igel and
Thomas Jansen and Tim Kovacs and Taras Kowaliw and
Manuel Lopez-Ibanez and Jose A. Lozano and Gabriel Luque and
John McCall and Alberto Moraglio and
Alison Motsinger-Reif and Frank Neumann and Gabriela Ochoa and
Gustavo Olague and Yew-Soon Ong and
Michael E. Palmer and Gisele Lobo Pappa and
Konstantinos E. Parsopoulos and Thomas Schmickl and Stephen L. Smith and
Christine Solnon and Thomas Stuetzle and El-Ghazali Talbi and
Daniel Tauritz and Leonardo Vanneschi",
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isbn13 = "978-1-4503-1963-8",
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pages = "973--980",
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keywords = "genetic algorithms, genetic programming, grammatical
evolution",
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month = "6-10 " # jul,
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organisation = "SIGEVO",
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address = "Amsterdam, The Netherlands",
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DOI = "doi:10.1145/2463372.2463490",
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publisher = "ACM",
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publisher_address = "New York, NY, USA",
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abstract = "The Central Dogma of Biology states that genes made
proteins that made us. This principle has been revised
in order to incorporate the role played by a multitude
of regulatory mechanisms that are fundamental in both
the processes of inheritance and development.
Evolutionary Computation algorithms are inspired by the
theories of evolution and development, but most of the
computational models proposed so far rely on a simple
genotype to phenotype mapping. During the last years
some researchers advocate the need to explore
computationally the new biological understanding and
have proposed different gene expression models to be
incorporated in the algorithms.Two examples are the
Artificial Regulatory Network (ARN) model, first
proposed by Wolfgang Banzhaf, and the Grammatical
Evolution (GE) model, introduced by Michael O'Neill and
Conor Ryan. In this paper, we show how a modified
version of the ARN can be combined with the GE
approach, in the context of automatic program
generation. More precisely, we rely on the ARN to
control the gene expression process ending in an
ordered set of proteins, and on the GE to build, guided
by a grammar, a computational structure from that set.
As a proof of concept we apply the hybrid model to two
benchmark problems and show that it is effective in
solving them.",
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notes = "Also known as \cite{2463490} GECCO-2013 A joint
meeting of the twenty second international conference
on genetic algorithms (ICGA-2013) and the eighteenth
annual genetic programming conference (GP-2013)",
- }
Genetic Programming entries for
Rui Lopes
Ernesto Costa
Citations