- author = "Yuh-Jyh Hu",
- title = "{GPRM}: a genetic programming approach to finding common {RNA} secondary structure elements",
- journal = "Nucleic Acids Research",
- year = "2003",
- volume = "31",
- number = "13",
- pages = "3446--3449",
- month = "1 " # jul,
- keywords = "genetic algorithms, genetic programming",
-
URL = "
http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=168928.pdf",
-
URL = "
http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=168928",
-
DOI = "
doi:10.1093/nar/gkg521",
-
URL = "http://hdl.handle.net/11536/27741",
- size = "4 pages",
- abstract = "RNA molecules play an important role in many biological activities. Knowing its secondary structure can help us better understand the molecule's ability to function. The methods for RNA structure determination have traditionally been implemented through biochemical, biophysical and phylogenetic analyses. As the advance of computer technology, an increasing number of computational approaches have recently been developed. They have different goals and apply various algorithms. For example, some focus on secondary structure prediction for a single sequence; some aim at finding a global alignment of multiple sequences. Some predict the structure based on free energy minimisation; some make comparative sequence analyses to determine the structure. In this paper, we describe how to correctly use GPRM, a genetic programming approach to finding common secondary structure elements in a set of unaligned coregulated or homologous RNA sequences.",
-
notes = "GPRM can be accessed at
http://bioinfo.cis.nctu.edu.tw/service/gprm/ Computer
and Information Science Department, National Chiao Tung
University, 1001 Ta Hsueh Rd, Hsinchu, Taiwan
*Tel: +886 35731795; Fax: +886 35721490; Email: yhu@cis.nctu.edu.tw
PMID: 12824343
Cited by \cite{Kawaguchi:2005:NAR}",
