Genetic and Evolutionary Computation COnference

GECCO-2005

Table of Contents

Author Index

Biological Applications

A Hybrid Genetic Algorithm with Pattern Search for Finding Heavy 
Atoms in Protein Crystals  (page 377)
J. L. Payne, M. J. Eppstein (University of Vermont)

An Efficient Genetic Algorithm for Predicting Protein Tertiary Structures in the 2D HP Model  (page 385)
T. N. Bui, G. Sundarraj (The Pennsylvania State University at Harrisburg)

A Co-evolutionary Hybrid Algorithm for Multi-Objective Optimization 
of Gene Regulatory Network Models  (page 393)
P. Koduru, S. Das, S. Welch, J. L. Roe, Z. P. Lopez-Dee (Kansas State University)

Discovering Biological Motifs With Genetic Programming: 
Comparing linear and tree-based representations for unaligned 
protein sequences  (page 401)
R. Seehuus, A. Tveit, O. Edsberg (Norwegian University of Science and Technology)

Using Evolutionary Computation Methods to Support Analytical Models for the Evolution and Maintenance of Conditional Strategies in Chthamalus anisopoma  (page 409)
G. C. Townsend, W. N. Hazel, R. Smock (DePauw University)

A GA for Maximum Likelihood Phylogenetic Inference 
using Neighbour-Joining as a Genotype to Phenotype Mapping  (page 415)                      (Return to Top)
L. Poladian (University of Sydney)

A Multi-Objective Evolutionary Approach to Peptide
Structure Redesign and Stabilization  (page 423)
T. Hohm (Stiftung caesar)
D. Hoffmann (Bingen University of Applied Sciences)

Particle Swarm Optimization for Analysis of Mass Spectral Serum Profiles  (page 431)
H. Ressom, R. S. Varghese, D. Saha, E. Orvisky, L. Goldman (Georgetown University)
E. F. Petricoin (NIH)
T. P. Conrads, T. D. Veenstra (NCI)
M. Abdel-Hamid (Viral Hepatitis Research Laboratory, NHTMRI)
C. A. Loffredo, R. Goldman (Georgetown University)

Inference of Gene Regulatory Networks Using S-system 
and Differential Evolution  (page 439)
N. Noman, H. Iba (The University of Tokyo)

MDGA: Motif Discovery Using A Genetic Algorithm  (page 447)
D. Che, Y. Song, K. Rasheed (University of Georgia)

Extraction of Informative Genes from Microarray Data  (page 453)
T. K. Paul, H. Iba (The University of Tokyo)

Epileptic Seizure Detection by Means of Genetically Programmed 
Artificial Features  (page 461)
H. Firpi, E. Goodman (Michigan State University)
J. Echauz (BioQuantix Corporation)

Biological Applications: Posters                                                              (Return to Top)

Identifying Valid Solutions for the Inference of Regulatory Networks  (page 469)
C. Spieth, F. Streichert, N. Speer, A. Zell (University of Tübingen)

Evolving an Improved Axial Structure for Fibrillar Collagen  (page 471)
D. E. Cairns, G. J. Cameron (University of Stirling)
T. J. Wess (Cardiff University)

GA-based Approach to Discover Meaningful Biclusters  (page 473)
J. S. Aguilar-Ruiz (University of Seville)
F. Divina (University of Tilburg)

Primer Design for Multiplex PCR Using a Genetic Algorithm  (page 475)
F.-M. Lin (National Central University)
H.-D. Huang, H.-Y. Huang (National Chiao Tung University)
J.-T. Horng (National Central University)

A Multiple Objective Evolutionary Algorithm for Multiple 
Sequence Alignment  (page 477)
P. Seeluangsawat, P. Chongstitvatana (Chulalongkorn University)

The Impact of Pseudorandom Number Quality on P-RnaPredict, 
a Parallel Genetic Algorithm for RNA Secondary Structure Prediction  (page 479)
K. C. Wiese, A. Hendriks, A. Deschênes, B. B. Youssef (Simon Fraser University)